BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E09SP1|AL429076
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 1605 0.0
>3x_Contig1626
Length = 17698
Score = 1605 bits (806), Expect = 0.0
Identities = 875/891 (98%), Gaps = 9/891 (1%)
Strand = Plus / Minus
Query: 3 atcgataaaatcaagcaccatatccaattgatgaagcataggatccattccgttatacac 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6064 atcgataaaatcaagcaccatatccaattgatgaagcataggatccattccgttat-cac 6006
Query: 63 caaggttgtcaatatgacacactctaaatccatcttgtatacagtagatatatgatgacc 122
|||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 6005 caaggttgtcaatatgacacactctaaatccatcttgtt--cagta-atat-tgatgacc 5950
Query: 123 gatgctgctatgagaattagcggtaggtaaaacattaaacgaattgctccgttttctctc 182
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5949 gatgctgct-tgagaattagcggtaggtaaaacattaaacgaattgctccgttttctctc 5891
Query: 183 catatttcttgctggtaatgtaatctcttcattaacagtatwagatcttggtctacacca 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5890 catatttcttgctggtaatgtaatctcttcattaacagtattagatcttggtctacacca 5831
Query: 243 cgaaacggattctccaacggagatgatatttcttattcctaattcttttaacatttcagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5830 cgaaacggattctccaacggagatgatatttcttattcctaattcttttaacatttcagg 5771
Query: 303 gcattgtgcatgtttaarggamcccagawawaaatggggaaggatccttgacggtaaagg 362
||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||||||
Sbjct: 5770 gcattgtgcatgtttaagggaccccagatataaatggggaaggatccttgacggtaaagg 5711
Query: 363 acctttgcatttcaagaacggtgaatcagttggtggttttatgaagaatatatttactga 422
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5710 acctttgcatttcaagaacggtgaatcagttggtggttttatgaagaatat-tttactga 5652
Query: 423 aagtatccgcatctatagtcaatggtagctttggatcggtcgtttcatttctcatgggag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5651 aagtatccgcatctatagtcaatggtagctttggatcggtcgtttcatttctcatgggag 5592
Query: 483 aatactgtcttaatagtagtctctagatgtgataaaacctgaatgtcaatcaagaacagg 542
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5591 aatactgtcttaatagt-gtctctagatgtgataaaacctgaatgtcaatcaagaacagg 5533
Query: 543 aagaatggcctgtcatattttttatgcaaatcgaatatcacttcatctaaggatttgtcg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5532 aagaatggcctgtcatattttttatgcaaatcgaatatcacttcatctaaggatttgtcg 5473
Query: 603 agtttaaagatcaaatatgcaacgagtaggaatgatgtctctgtgtatccatctgggcga 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5472 agtttaaagatcaaatatgcaacgagtaggaatgatgtctctgtgtatccatct-ggcga 5414
Query: 663 gaagactaatttgttttgcgggtagaattctaacaaatggcaaacgtttaaaattgtttg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5413 gaagactaatttgttttgcgggtagaattctaacaaatggcaaacgtttaaaattgtttg 5354
Query: 723 aatggaatctaagtttaaatttcccagtccgatagagccggaactaggaaaactcaacca 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5353 aatggaatctaagtttaaatttcccagtccgatagagccggaactaggaaaactcaacca 5294
Query: 783 gacgggagtgtccacaggatgtttgattaactctgaaattttctccaaagacggcagttg 842
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5293 gacgggagtatccacaggatgtttgattaactctgaaattttctccaaagacggcagttg 5234
Query: 843 agcgttttcaaagcaattgataaacaaacgccaatcattagtctttgaagg 893
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5233 agcgttttcaaagcaattgataaacaaacgccaatcattagtctttgaagg 5183
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6660
Number of Sequences: 1807
Number of extensions: 6660
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)